DNA

Part:BBa_J35030

Designed by: Andrey Kuznetsov   Group: iGEM06_Freiburg   (2006-10-28)

GCN4 bZIP binding motive

Complex of GCN4 bZIP with DNA

Protein patterning by DNA ORIGAMI

GCN4 bZIP binding consensus sequence: TGA(C/G)TCA

References:

[http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=2674675 Oliphant A.R.], Brandl C.J., Struhl K. 1989. Defining the sequence specificity of DNA-binding proteins by selecting binding sites from random-sequence oligonucleotides: analysis of yeast GCN4 protein. Mol. Cell. Biol. 9:2944-2949

GCN4 bZIP [http://www.rcsb.org/pdb/explore/explore.do?structureId=1YSA (1YSA)]

[http://omnibus.uni-freiburg.de/~kouznet/th00a.htm Anisimova S.A.], Kuznetsov A.V., Erokhin V.E., Voronina O.L., Virjasov S.N., Kazankova I.I., Somov A.N., Lunin V.G. Sperm-mediated transfer of the complex DNA:protein:lipids into mussel ova // II-d International Researh Conference "Biotechnology in the plant and livestock industry and veterinary". Moscow. Russia. October 18-19. 2000. P. 132-134.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None